Publications

BOOK CHAPTERS


Frontiers in Biophotonics for Translational Medicine  The Nano-Micro Interface  Introduction to Plasmonics  

    Biofunctional Surfaces TOC Geddes


external   K. Toma, M. Toma, M. Bauch, S. Hageneder, J. Dostalek, Fluorescence Biosensors Utilizing Grating-Assisted Plasmonic Amplification in  "Surface Plasmon Enhanced, Coupled, and Controlled Fluorescence", C. Geddes (eds), Willey, NJ, ISBN: 978-1-118-02793-6, 2017 pdf

external   J. Dostalek, Plasmonic Amplification for Fluorescence Bioassays Utilizing Propagating Surface Plasmons in  "Encyclopedia of Nanotechnology",  Springer Science + Business Media, Dordrecht (2015) DOI 10.1007/978-94-007-6178-0_100986-1  pdf

external   A. T. Reiner, K. Toma, A. R. Brisson, D. Pils, W. Knoll, J. Dostalek, Plasmonic Exosome Biosensors for Medical Diagnostics in  "Frontiers in Biophotonics for Translational Meicine",  Progress in Optical Science and Photonics 3, pp 249-272, M. Olivo and U.S. Dinish (eds), Springer Science+Business Media Singapore (2016) DOI 10.1007/978-981-287-627-0_8 pdf

external   W. Knoll, A. Kasry, C.J. Huang, Y. Wang, J. Dostalek, Surface-Wave Enhanced Biosensing in  "Introduction to Plasmonics",  pp. 119–143, Sabine Szunerits (eds), Singapore: Pan Stranford. (2015) ISBN: 978-98-1461312-5. pdf

external   W. Knoll, A. Kasry, J. Dostalek, Biofunctional Surfaces in "The Micro-Nano Interface: Bridging the Micro and Nano Worlds, 2nd Edition",  M. Van de Voorde, M. Werner, H-J. Fecht (eds): Wiley (2015) ISBN: 978-3-527-33633-3. pdf

external   Dostálek J and Knoll W,  Plasmonics in  "Polymer Science: A Comprehensive Reference", Vol 2, pp. 647–659, Matyjaszewski K and Möller M (eds.), Amsterdam: Elsevier BV. (2012) ISBN: 978-0-08-087862-1. pdf

external    Y. Wang, C. J. Huang, J. Dostalek, Evanescent wave biosensors with hydrogel binding matrix in "Handbook of Biofunctional Surfaces", Wolfgang Knoll (ed.), Pan Stanford Publishing, Singapore, (2012), ISBN: 9789814316637.  pdf

external  J. Dostalek, C. J. Huang, W. Knoll, Chapter 1.3: Surface plasmon resonance-based biosensors, in "Advanced surface design for biomaterial and life science applications", A.T.A. Jenkins, R. Foersch, H. Schoenherr (eds.), Wiley-VCH, Weinheim (2009), 29-49, ISBN: 978-3-527-40789-7. pdf

external    A. Kasry, J. Dostalek, W. Knoll, Chapter 5.4: Long range surface plasmon-enhanced fluorescence spectroscopy as a platform for biosensors in "Advanced surface design for biomaterial and life science applications",  A.T.A. Jenkins, R. Foersch, H. Schoenherr (eds.), Wiley-VCH, Weinheim (2009), 447-460, ISBN: 978-3-527-40789-7. pdf

external    J. Dostalek, J. Homola, SPR Biosensors for Environmental Monitoring in "Surface Plasmon Resonance Based Sensors", J. Homola (ed.), Springer (2006), ISBN: 978-3-540-33918-2.

external    J. Dostalek, J. Ladd, S. Jiang, J. Homola, SPR Biosensors for Detection of Biological and Chemical Analytes in "Surface Plasmon Resonance Based Sensors",  J. Homola (ed), Springer (2006), ISBN: 978-3-540-33918-2

 

JOURNAL PAPERS

2018

TOC Quilis TOC Stelling 2018

external      Christian Stelling, Stefan Fossati, Jakub Dostalek, Markus Retsch, Surface plasmon modes of nanomesh-on-mirror nanocavities prepared by nanosphere lithograhy, Nanoscale, 2018, accepted. pdf

external      Esteban Piccinini, Sebastian Alberti, Gabriel S. Longo, Teresa Berninger, Jakub Dostalek, Fernando Battaglini, Omar Azzaroni, and Wolfgang Knoll, Pushing the boundaries of interfacial sensitivity in graphene FET sensors:  Polyelectrolyte multilayer films strongly increase the Debye screening length, Journal of Physical Chemistry C, 2018, 122 (18), pp 10181–10188. pdf

external     Nestor G. Quilis, Mederic Lequeux, Pryiamvada Venugopalan, Imran Khan, Souhir Boujday, Wolfgang Knoll, Marc Lamy de la Chapelle, Jakub Dostalek, Tunable laser interference lithography preparation of plasmonic nanoparticle arrays tailored for SERS, Nanoscale, 2018, 10, 10268-10276 . pdf

external     Agnes Reiner, Stefan Fossati, Jakub Dostalek, Biosensor platform for parallel surface plasmon-enhanced epifluorescence and surface plasmon resonance detection, Sensors and Actuators B, 2018, 257, 594-601. pdf

external     Jinling Zhang, Imran Khan, Zhang Qingwen, Xiaohu Liu, Jakub Dostalek, Bo Liedberg, Yi WangLipopolysaccharides detection on a grating-coupled surface plasmon resonance smartphone biosensor, Biosensors and Bioelectronics, 2018, 99, 312-317. pdf


2017

  Riedel2017 Pirani   Vagias 2017 hairpin aptamer  Split aptamer

external      Khulan Sergelen, Christian Petri, Ulrich Jonas, and  Jakub DostalekFree-standing hydrogel-particle composite membrane with dynamically switchable permeability, Biointerphases, 2017, 12, 051002. pdf

external      Agnes Reiner,  Nicolas Guillermo Ferrer,  Priyamvada Venugopalan,  Ruenn Chai Lai,  Saikiam Lim  and  Jakub DostalekMagnetic nanoparticle-enhanced surface plasmon resonance biosensor for extracellular vesicle analysis, Analyst, 2017, 142, 3913-3921. pdf

external      Khulan Sergelen, Bo Liedberg, Wolfgang Knoll, and Jakub Dostálek, Surface plasmon field-enhanced fluorescence reversible split aptamer biosensor, Analyst, 2017, 142, 2995-3001. pdf

external      Khulan Sergelen, Stefan Fossati, Aysegül Turupcu, Chris Oostenbrink, Bo Liedberg, Wolfgang Knoll, and Jakub DostálekPlasmon field-enhanced fluorescence energy transfer for hairpin aptamer assay readout, ACS Sensors, 2017, 2 (7), 916-923. pdf

external      Imran Khan, Martin Bauch, Theodoros Dimopoulos, and Jakub Dostalek, Nanostructured as-deposited indium tin oxide thin films for broadband antireflection and light trapping, Nanotechnology, 2017, 28(32), 325201. pdf

external      A. Vagias, K. Sergelen, K. Koynov, P. Košovan, J. Dostalek, U. Jonas, W. Knoll, G. Fytas, Diffusion and permeation of labeled IgG in grafted hydrogels, Macromolecules, 2017, 50 (12), 4770–4779. pdf

external      F.A. Geiss, S. Fossati, I. Khan, N. Gisbert Quilis, W. Knoll, J. Dostalek, UV-SPR biosensor for biomolecular interaction studies, Proc. SPIE 10231, Optical Sensors 2017, (2017) 1023107 pdf

external      T. Riedel, S. Hageneder, F. Surman, O.Pop-Georgievski, C. Noehammer, M. Hofner, E. Brynda, C. Rodriguez-Emmeneger, J. Dostalek, Plasmonic Hepatitis B biosensor for the analysis of clinical saliva, Analytical Chemistry, 2017, 89 (5), 2972. pdf

external      F. Pirani, N. Sharma, A.M. Cencerrado, S. Fossati, C.Petri, U. Jonas, E. Descrovi, J.L. Toca-Herrera, J. Dostalek, Diffraction observation of responsive properties of hydrogel nanopillars, Macromolecular Chemistry and Physics, 2017, 218 (6), 1600400pdf

 

2016

 TOC Sharma OE 2016 JPCC Sharma 2015 TOC ADOM 2015

external      A. Karczmarczyk, C. Reiner-Rozman, S. Hageneder, M. Dubiak-Szepietowska, J. Dostalek, K.H. Feller, Fast and sensitive detection of ochratoxin A in red wine by nanoparticle-enhanced SPR, Analytica Chimica Acta, 2016, 937, 143-150pdf

external      S. Hageneder, M. Bauch, J. Dostalek, Plasmonically amplified bioassay - total internal reflection fluorescence vs. epifluorescence geometry, Talanta, 2016, 156-157, 225-231pdf

external      T. Riedel, F. Surman, S. Hageneder, O.Pop-Georgievski, C. Noehammer, M. Hofner, E. Brynda, C. Rodriguez-Emmendeger, J. Dostalek, Hepatitis B plasmonic biosensor for the analysis of clinical serum samples, Biosensors and Bioelectronics, 2016, 85, 272-279. pdf

external      Y. Wang, L. Wu, M. Bauch, Q. Zhang, J. Zhang, X. Liu, X. Zhou, P. Bai, J. Dostalek, B. Liedberg, Directional Fluorescence Emission Co-Enhanced by Localized and Propagating Surface Plasmons for Biosensing, Nanoscale, 2016, 8, 8008-8016pdf

external      A. Karczmarczyk, M. Dubiak-Szepietowska, M. Vorobii, C. Rodriguez-Cremmeneger, J. Dostalek, K.H. Feller, Sensitivie and rapid detection of aflatoxin M1 in milk utilizing enhanced SPR and p(HEMA) brushes, Biosensors and Bioelectronics, 2016, 81, 159-165pdf

external      F. Frascella, C. Petri, S. Ricciardi, L. Napione, P. Munzert, U. Jonas, J. Dostalek, F. Bussolino, C. Fabrizio Pirri, E. Descrovi. Hydrogel-Terminated Photonic Crystal for Label-Free Detection of Angiopoietin-1, Journal of Lightwave Technology, 2016, 34(15) 3641-3645pdf

external      N. Sharma, C. Petri, U. Jonas, J. Dostalek, Reversibly tunable plasmonic bandgap by responsive hydrogel grating, Optics Express, 2016, 24 (3), 2457-2465pdf

external      N. Sharma, H. Keshmiri, X. Zhou, T.I. Wong, C. Petri, U. Jonas, B. Liedberg, J. Dostalek, Tunable plasmonic nanohole arrays actuated by responsive hydrogel cushion, Journal of Physical Chemistry C, 2016, 120, 561-568pdf

external      I. Khan, H. Keshmiri, Kolb F., T. Dimopoulos, E.J.W. List-Kratochvil, J. Dostalek, Multidiffractive broadband plasmonic absorber, Advanced Optical Materials 2016, 4(3), 435-443pdf

 

2015

external      S. Gogalic, S. Hageneder, C. Ctortecka, M. Bauch, I. Khan, C. Preininger, U. Sauer, J. Dostalek, Plasmonically amplified fluorescence bioassays with microarray format, Proc. of SPIE Optical Sensors 2015, Vol. 9506, 950605pdf

external      H. Keshmiri, J. Dostalek, Plasmonic organic thin-film solar cell: light trapping by using conformal vs non-conformal relief gratings, Proc. of SPIE Metamaterials X 2015, Vol. 9502, 950210.  pdf

 

2014

TOC_Huang_Talanta   Sharma_2014 bauch 2014

external      M. Bauch, S. Hageneder, J. Dostalek, Plasmonic amplification for fluorescence assays with epi-fluorescence readout, Optics Express (2014), 22(26), 32026-32038. pdf

external      N. Sharma, C. Petri, U. Jonas, M. Bach, G. Tovar, K. Mrkvova, M. Vala, J. Homola, W. Knoll, J. Dostalek, Molecularly Imprinted Polymer Waveguides for Direct Optical Detection of Low Molecular Weight Analytes, Macromolecular Chemistry and Physics (2014), 215(23), 2395-2304. pdf

external       M. Bauch, K. Toma, M. Toma, Q. Zhang, J. Dostalek, Surface plasmon-enhanced fluorescence biosensors: a review, Plasmonics (2014), 9 (4), 781-799. pdf

external       CJ. Huang, W. Knoll, A. Sessitsch, J. Dostalek, SPR bacterial pathogen biosensors: the importance of fluidic conditions and probing depth, Talanta (2014), 122, 166-171. pdf


2013

TOC_KToma  MToma_TOC  LLSP

external       M. Bauch, J. Dostalek, Collective localized surface plasmon-enhanced fluorescence for high performance biosensors, Optics Express (2013) 21(17) pp 20470-20483. pdf

external       R. Mejard, J. Dostalek, CJ. Huang, H. Griesser, B. Thierry, Tunable and robust long range surface plasmon resonance for biosensor applications, Optical Materials (2013), 35 (23) pp 2507-2513. pdf

external       M. Toma, U. Jonas, A. Mateescu, W. Knoll, J. Dostalek, Active control of SPR by thermoresponsive hydrogels for biosensor applications, Journal of Physical Chemistry C (2013), 117(22), pp 11705-11712. pdf

external       K. Toma, M. Vala, P. Adam, J. Homola, W. Knoll, J. Dostalek, Compact surface plasmon-enhanced fluorescence biochip, Optics Express (2013), 21(8), 10121-10132. pdf

external       M. M. Pichler, S. Kupcu, C.J. Huang, J. Dostalek, D. Pum, U. B. Sleytr, P.Ertl, Nanotechnology advanced antifouling surfaces for the continuous electrochemical monitoring of glucose in the whole blood, Lab Chip (2013), 13, 1780. pdf

external      K. Toma, E. Descrovi, M. Toma, M. Ballarini, P. Mandracci, F.Giorgis, A.Mateescu, U. Jonas, W. Knoll, J. Dostalek, Bloch Surface Wave-Enhanced Fluorescence Spectroscopy Biosensor, Biosensors and Bioelectronics (2013), 43, 108-114. pdf

external       Q. Zhang, Y. Wang, A., Mateescu, K. Sergelen, A. Kibrom, U. Jonas, T. Wei, J. Dostalek, Biosensor Based on Hydrogel Optical Waveguide Spectroscopy for the Detection of 17β-Estradiol, Talanta, (2013), 104, 149-154. pdf

 

2012

       TOC mateescu

external      Y. Wang, W. Knoll, J. Dostalek, Long Range Surface Plasmon Resonance Biosensor for Magnetic Nanoparticle-Enhanced Detection of Bacterial Pathogens, Analytical Chemistry, (2012), 84, 8345-8350. pdf

external      M. Toma, K. Toma, P. Adam, J. Homola, W. Knoll, J. Dostalek, Surface plasmon-coupled emission on plasmonic Bragg gratings, Optics Express, (2012), 20(13), 14042. pdf

external       M. Toma, W. Knoll, J. Dostalek, Bragg-scattered surface plasmon microscopy, Plasmonics, (2012) 7(2), 293-299. pdf

external       A. Mateescu, Y. Wang, J. Dostalek, U. Jonas, Thin Hydrogel Films for Optical Biosensor Applications, Membranes, (2012), 2(1), 40-69. pdf

 

2011

                     

external       Y.Wang, J. Dostalek, W. Knoll, Magnetic Nanoparticle-Enhanced Biosensor Based On Grating-Coupled Surface Plasmon Resonance, Analytical Chemistry (2011), 83, 6202–6207.pdf

external        K.Toma, J. Dostalek, W. Knoll, Long-Range Surface Plasmon-Coupled Emission for Biosensor Applications, Optics Express (2011), Vol. 19, Iss. 12, pp. 11084–11089. pdf

external       C.J. Huang, J. Dostalek, A. Sessitsch, W. Knoll, Long-Range Surface Plasmon-Enhanced Fluorescence Spectroscopy Biosensor for Ultrasensitive Detection of E. coli O157:H7, Analytical Chemistry (2011), 83 (3), 674–677. pdf

 

2010

external   Y. Wang, J. Dostalek, W. Knoll, Magnetic nanoparticle-enhanced SPR biosensor, Proc. Engineering (2010), 5, 1017-1020.  pdf

external    C.J. Huang, J. Dostalek, W. Knoll, Long range surface plasmon and hydrogel waveguide field-enhanced fluorescence biosensor with 3D binding matrix: on the role of mass transport, Biosensors and Bioelectronics (2010), 26, 4, 1425-1431.  pdf

external    E-K. Sinner, S. Ritz, Y. Wang, J. Dostalek, U. Jonas, W. Knoll, Molecularly Controlled Functional Architectures at Biointerfaces, Materials Today (2010), 23, 4, 47-55. pdf

external    Y. Wang, C.J. Huang, U. Jonas, T. Wei, J. Dostalek, W. Knoll, Biosensor based on Hydrogel Optical Waveguide Spectroscopy, Biosensors and Bioelectronics, (2010), 25, 1663-1668. pdf

external    C.J. Huang, J. Dostalek, W. Knoll, Optimization of layer structure supporting long range surface plasmons for surface plasmon-enhanced fluorescence spectroscopy biosensors, Journal of Vacuum Society and Technology B, (2010), 28, 1, 66-72. pdf 

 

2009

external    Y. Wang, Annette Brunsen, U. Jonas, J. Dostalek, W. Knoll, Prostate Specific Antigen Biosensor Based on Long Range Surface Plasmon-Enhanced Fluorescence Spectroscopy and Dextran Hydrogel Binding Matrix, Analytical Chemistry, (2009) 81, 23, 9625-9632. pdf

external    A. Aulasevich, R.F. Roskamp, U. Jonas, B. Menges, J. Dostalek, W. Knoll, Optical waveguide spectroscopy for the investigation of protein-functionalized hydrogel films, Macromolecular Rapid Communications, (2009), 30, 872-877. pdf

external    Y. Wang, J. Dostalek, W. Knoll, Long range surface plasmon-enhanced fluorescence spectroscopy for the detection of aflatoxin M1 in milk, Biosensors and Bioelectronics, (2009), 24, 2264-2267.  pdf

external    J. Dostalek, R. F. Roskamp, W. Knoll, Coupled long range surface plasmons for the investigation of thin films and interfaces, Sensors and Actuators B, (2009), 139, 9-12.  pdf

external    C.J. Huang, U. Jonas, J. Dostalek, W. Knoll; "Biosensor platform based on surface plasmon-enhanced fluorescence spectroscopy and responsive hydrogel binding matrix", Proc. SPIE 2009, Vol. 7356, 735625. pdf 

 

2008

external    W. Knoll, A. Kasry, F. Yu, Y. Wang, A. Brunsen, J. Dostalek, New concepts with surface plasmons and nano-biointerfaces, Journal of Nonlinear Optical Physics & Materials, (2008), Vol. 17, No. 2, pp 121-129.  pdf

external      J. Dostalek, W. Knoll, Biosensors based on surface plasmon-enhanced fluorescence spectroscopy, Biointerphases, (2008), Vol. 3, No.3, 12-22. pdf

external    J. Dostalek, J. Homola, Surface plasmon resonance sensor based on an array of diffraction gratings for highly-parallelized observation of biomolecular interactions, Sensors and Actuators B, (2008), 129/1, 303-310 pdf 

 

2007

external       J. Dostalek, P. Adam, P. Kvasnicka, O. Telezhnikova, J. Homola, Spectroscopy of Bragg-scattered surface plasmons for characterization of thin biomolecular films, Optics Letters 32 (2007), 2903-2905. pdf

external    J. Dostalek, A.Kasry, W. Knoll, Long range surface plasmons for observation of biomolecular binding events at metallic surfaces, Plasmonics (2007) 2, 97-106. pdf

external       J. Dostalek, J. Pribyl, P. Skladal, J. Homola, Multichannel SPR biosensor for detection of endocrine disrupting compounds, Analytical and Bioanalytical Chemistry, (2007) 389:1841-1847

external       P. Adam, J. Dostálek, O. Telezhnikova, J. Homola: SPR Sensor Based on a Bi-diffractive Grating, Proc SPIE 2007,Vol 6585, 65851Y. 

external       M. Vala, J. Dostálek, J. Homola: Diffraction Grating-Coupled Surface Plasmon Resonance Sensor Based on Spectroscopy of Long-Range and Short-Range Surface Plasmons, Proc. SPIE 2007, VOl 6585, 658522. 


                                                                      2006 and older

external       P. Adam, J. Dostalek, J. Homola, Multiple surface plasmon spectroscopy for study of biomolecular systems, Sensors and Actuators B, 113, (2006) 771-781. 

external       J. Dostalek, H. Vaisocherova, J. Homola, Multichannel Surface Plasmon Resonance Biosensor with Wavelength Division Multiplexing, Sensors and Actuators B, 108 (2005) 758-764.

external       J. Dostalek, J. Homola, M. Miler, Rich information format surface plasmon resonance biosensor based on an array of diffraction gratings, Sensors and Actuators B, 107 (2005) 154-161.

external       J. Homola , H. Vaisocherova, J. Dostalek, M. Piliarik, Multianalyte surface plasmon resonance biosensing, Methods, 37 (2005), 26-36. 

external      J. Rysava, J. E .Dyr, J. Homola, J. Dostalek, P. Krizova, L. Masova, J. Suttnar, J. Briestensky, I. Santar, K. Myska, M.Pecka, Surface interactions of oxidized cellulose with fibrin(ogen) and blood platelets, Sensors and Actuators B, 90 (2003) 243-249.

external       J. Homola, J. Dostalek, S. Chen, A. Rasooly, S. Jiang, S. S. Yee: Spectral Surface Plasmon Resonance Biosensor for Detection of Staphylococcal Enterotoxin B (SEB) in Milk , Journal of Microbiology, 75, (2002) 61-69.

external       J. Homola, J. Dostalek, S. Chen, A. Rasooly, Shaoyi Jiang, S. S. Yee, Reference-Compensated Surface Plasmon Resonance Biosensor for Detection of Foodborne Pathogens, International Conference on Optical Engineering for Sensing and Nanotechnology, Yokohama, Japan, June 2001, SPIE Proceedings, Vol. 4416, 280-283.

external        J. Homola, J. Dostalek, J. Ctyroky, A novel approach to surface plasmon resonance multichannel sensing, International Conference on Optical Engineering for Sensing and Nanotechnology, Yokohama, Japan, June 2001, SPIE Proceedings, Vol. 4416, 86-89.

external        J. Dostalek, J. Ctyroky, J. Homola, E. Brynda, M. Skalsky, P. Nekvindova, J. Spirkova, J. Skvor, J. Schröfel: Surface plasmon resonance biosensors based on integrated optical waveguides, Sensors and Actuators B, 76 (2001), 8-12.

external       J. Homola, H. B. Lu, G. G. Nenninger, J. Dostalek, S. S. Yee: A novel multichannel surface plasmon resonance biosensor, Sensors and Actuators B, 76 (2001) 403-410.

external        J. V. Koubova, E. Brynda, L. Karasova, J. Skvor, J. Homola, Dostalek, P. Tobiska, J. Rosicky: Detection of foodborne pathogens using surface plasmon resonance biosensors, Sensors and Actuators B, 74 (2001), 100-105.

 

PATENTS

-      J. Ctyroky, J. Dostalek, J. Homola: Means for Multichannel Detection in Optical Sensors with Surface Plasmons, registered at Czech Patent and Trademark Office in 11/22/2000, PV-2000-4320.

-     O. Telezhnikova, J. Dostálek, J. Homola: Method For Spectroscopy Of Surface Plasmons In Surface Plasmon Resonance Sensors And An Element For The Use Of Thereof, CZ299489, US20080144027, CA2598118, CN101175989

-     K. Toma, J. Dostalek, W. Knoll, J. Homola, M. Vala, P. Adam, Compact Biochip for Plasmon-Enhanced Fluorescence Biosensor, submitted to European Patent Office, EP12168046.

-      H. Xie, J. Han, A. Kibrom, W. Knoll, J. Dostalek, A hydrogel, for use in a biosensor with optics based detection of analytes, patent application, WO 2014116179, EP13872642